Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs113010684 chr13:114615754 G/A 4.7E-7 111 13.1 19.82 0.5 KM Plot
LAML rs113129259 chr19:33967636 C/T 2.15E-5 110 16.77 12.2 3 KM Plot
LAML rs113145978 chr7:1000578 G/C 3.08E-5 106 13.1 20.27 0 KM Plot
LAML rs113297557 chr13:21844412 T/C 1.06E-8 109 16.2 13.1 0 KM Plot
LAML rs11334012 chr11:93188856 TA/T 6.87E-5 108 6.13 12.17 16.3 KM Plot
LAML rs11340609 chr14:90765423 CT/C 5.64E-5 110 2.02 21.87 12.7 KM Plot
LAML rs1134389 chr19:12542772 C/T 1.87E-5 111 6.13 22.37 13.1 KM Plot
LAML rs11348441 chr11:34290340 GA/G 0.000145 111 14.18 15.77 0 KM Plot
LAML rs113489856 chr13:114617056 C/T 4.7E-7 111 13.1 19.82 0.5 KM Plot
LAML rs113553167 chr13:114953991 G/A 4.33E-6 107 13.15 17.2 0 KM Plot
LAML rs113607209 chr2:240547865 G/A 0.000174 106 13.2 33.47 0 KM Plot
LAML rs11373933 chr4:99037403 C/CA 0.000172 110 13.15 23.3 0 KM Plot
LAML rs113847938 chr13:114926352 T/G 3.67E-5 110 13.2 19.33 2.55 KM Plot
LAML rs113848315 chr19:33911608 A/AAAAT 3.87E-5 107 18.23 16.3 2.02 KM Plot
LAML rs113926595 chr1:95395616 C/T 9.48E-5 111 13.1 22.83 0 KM Plot